Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 SERBP1P3-201ENST00000459980 809 ntBASIC13.79□□□□□ -0.2
SHFQ7M4L6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AC093520.2-201ENST00000561830 333 ntBASIC13.79□□□□□ -0.2
SHFQ7M4L6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 AC009093.7-201ENST00000623853 1223 ntBASIC13.79□□□□□ -0.2
SHFQ7M4L6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SHFQ7M4L6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHFQ7M4L6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.78□□□□□ -0.2
SHFQ7M4L6 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 AC074338.1-201ENST00000416825 156 ntBASIC13.78□□□□□ -0.2
SHFQ7M4L6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 SLED1-202ENST00000512051 380 ntBASIC13.78□□□□□ -0.2
SHFQ7M4L6 AL079307.3-201ENST00000556114 283 ntBASIC13.78□□□□□ -0.2
SHFQ7M4L6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 AL359183.1-201ENST00000623796 2132 ntBASIC13.78□□□□□ -0.2
SHFQ7M4L6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.78□□□□□ -0.2
SHFQ7M4L6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHFQ7M4L6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.77□□□□□ -0.2
SHFQ7M4L6 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SHFQ7M4L6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHFQ7M4L6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SHFQ7M4L6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHFQ7M4L6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.77□□□□□ -0.2
SHFQ7M4L6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHFQ7M4L6 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SHFQ7M4L6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHFQ7M4L6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.77□□□□□ -0.2
SHFQ7M4L6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 AC023141.5-201ENST00000458585 616 ntBASIC13.77□□□□□ -0.21
SHFQ7M4L6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.77□□□□□ -0.21
SHFQ7M4L6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHFQ7M4L6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms