Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 CHCHD2P3-201ENST00000603038 451 ntBASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC093726.1-201ENST00000608064 963 ntBASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC008761.3-201ENST00000624803 892 ntBASIC17.07■□□□□ 0.32
SHC4Q6S5L8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
SHC4Q6S5L8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 MIR661-201ENST00000384842 89 ntBASIC17.06■□□□□ 0.32
SHC4Q6S5L8 EIF3FP3-201ENST00000434851 1086 ntBASIC17.06■□□□□ 0.32
SHC4Q6S5L8 INGX-202ENST00000489074 768 ntBASIC17.06■□□□□ 0.32
SHC4Q6S5L8 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.06■□□□□ 0.32
SHC4Q6S5L8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AC123567.1-201ENST00000548294 1261 ntBASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SHC4Q6S5L8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 KLF2P2-201ENST00000416807 1039 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 AC104596.2-201ENST00000512793 793 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 RNA5SP421-201ENST00000516864 134 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 AC009118.2-201ENST00000613275 655 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 AC005252.2-201ENST00000624630 1141 ntBASIC17.05■□□□□ 0.32
SHC4Q6S5L8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SHC4Q6S5L8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms