Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 MIR8072-201ENST00000614241 80 ntBASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.67□□□□□ -0.06
LETMD1Q6P1Q0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RFPL4AP1-201ENST00000530883 850 ntBASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AC093813.1-201ENST00000605066 256 ntBASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AC006538.3-201ENST00000612495 578 ntBASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 AC027601.5-201ENST00000624065 2482 ntBASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LETMD1Q6P1Q0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
LETMD1Q6P1Q0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms