Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 GIMAP3P-201ENST00000495150 836 ntBASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 MIR5189-201ENST00000577370 114 ntBASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 KRT8P35-201ENST00000483942 1338 ntBASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 AC018665.1-201ENST00000622927 1362 ntBASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 LRRC59-203ENST00000576448 1531 ntBASIC16.35■□□□□ 0.21
CBWD3Q5JTY5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 AP001267.2-201ENST00000532619 2086 ntBASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 INTS4P1-203ENST00000641008 3683 ntBASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 AP006294.1-201ENST00000415407 339 ntBASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 AC010319.3-201ENST00000597028 470 ntBASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
CBWD3Q5JTY5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CBWD3Q5JTY5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 ACTG1P3-201ENST00000431775 1114 ntBASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 RN7SL837P-201ENST00000463010 287 ntBASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 AP005018.1-201ENST00000525475 301 ntBASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 AC009486.1-201ENST00000569860 813 ntBASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.33■□□□□ 0.2
CBWD3Q5JTY5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms