Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC105233.6-201ENST00000642093 218 ntBASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 BEND3P1-201ENST00000421591 1944 ntBASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 AC084364.1-201ENST00000551967 1556 ntBASIC15.41■□□□□ 0.06
KHDC1Q4VXA5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC092552.1-201ENST00000547243 906 ntBASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC136759.1-202ENST00000530858 2194 ntBASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
KHDC1Q4VXA5 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.39■□□□□ 0.06
KHDC1Q4VXA5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.39■□□□□ 0.05
KHDC1Q4VXA5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms