Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SKP1P63208 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 AC023157.3-201ENST00000619086 2088 ntBASIC14.43□□□□□ -0.1
SKP1P63208 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SKP1P63208 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
SKP1P63208 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SKP1P63208 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SKP1P63208 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.43□□□□□ -0.1
SKP1P63208 GPR53P-205ENST00000457298 1084 ntBASIC14.43□□□□□ -0.1
SKP1P63208 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.43□□□□□ -0.1
SKP1P63208 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.43□□□□□ -0.1
SKP1P63208 AP001889.1-201ENST00000525414 633 ntBASIC14.43□□□□□ -0.1
SKP1P63208 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SKP1P63208 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 AC018665.1-201ENST00000622927 1362 ntBASIC14.43□□□□□ -0.1
SKP1P63208 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.43□□□□□ -0.1
SKP1P63208 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 AP002414.2-201ENST00000591780 3365 ntBASIC14.43□□□□□ -0.1
SKP1P63208 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SKP1P63208 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SKP1P63208 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SKP1P63208 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SKP1P63208 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SKP1P63208 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 AC073347.1-201ENST00000421633 2643 ntBASIC14.42□□□□□ -0.1
SKP1P63208 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.42□□□□□ -0.1
SKP1P63208 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms