Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.34□□□□□ -0.43
LMO4P61968 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LMO4P61968 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LMO4P61968 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.33□□□□□ -0.43
LMO4P61968 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.33□□□□□ -0.43
LMO4P61968 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LMO4P61968 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 AC011742.3-201ENST00000439053 820 ntBASIC12.33□□□□□ -0.44
LMO4P61968 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 RPL18P13-201ENST00000478088 569 ntBASIC12.33□□□□□ -0.44
LMO4P61968 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 AC132192.2-201ENST00000596206 1147 ntBASIC12.33□□□□□ -0.44
LMO4P61968 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.33□□□□□ -0.44
LMO4P61968 AC026740.1-201ENST00000607068 791 ntBASIC12.33□□□□□ -0.44
LMO4P61968 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LMO4P61968 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
LMO4P61968 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO4P61968 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
LMO4P61968 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.33□□□□□ -0.44
LMO4P61968 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LMO4P61968 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LMO4P61968 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO4P61968 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
LMO4P61968 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.32□□□□□ -0.44
LMO4P61968 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO4P61968 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.32□□□□□ -0.44
LMO4P61968 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO4P61968 PUDPP3-201ENST00000445368 636 ntBASIC12.32□□□□□ -0.44
LMO4P61968 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 KLF2P1-201ENST00000447438 1042 ntBASIC12.32□□□□□ -0.44
LMO4P61968 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.32□□□□□ -0.44
LMO4P61968 MARK2P5-201ENST00000507649 634 ntBASIC12.32□□□□□ -0.44
LMO4P61968 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 CHMP4BP1-201ENST00000556017 588 ntBASIC12.32□□□□□ -0.44
LMO4P61968 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO4P61968 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 AC090164.2-201ENST00000611487 516 ntBASIC12.32□□□□□ -0.44
LMO4P61968 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.32□□□□□ -0.44
LMO4P61968 AP001505.2-201ENST00000616815 443 ntBASIC12.32□□□□□ -0.44
LMO4P61968 AL136295.7-201ENST00000619226 1200 ntBASIC12.32□□□□□ -0.44
LMO4P61968 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LMO4P61968 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.32□□□□□ -0.44
LMO4P61968 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms