Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RPS3AP61247 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.33□□□□□ -0.11
RPS3AP61247 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
RPS3AP61247 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.33□□□□□ -0.11
RPS3AP61247 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.11
RPS3AP61247 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.33□□□□□ -0.12
RPS3AP61247 EEF1DP4-201ENST00000446006 880 ntBASIC14.33□□□□□ -0.12
RPS3AP61247 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.33□□□□□ -0.12
RPS3AP61247 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.33□□□□□ -0.12
RPS3AP61247 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.33□□□□□ -0.12
RPS3AP61247 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.33□□□□□ -0.12
RPS3AP61247 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPS3AP61247 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.33□□□□□ -0.12
RPS3AP61247 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPS3AP61247 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPS3AP61247 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.32□□□□□ -0.12
RPS3AP61247 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 AC135586.1-201ENST00000539323 574 ntBASIC14.32□□□□□ -0.12
RPS3AP61247 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.32□□□□□ -0.12
RPS3AP61247 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 LINC02560-201ENST00000596379 459 ntBASIC14.32□□□□□ -0.12
RPS3AP61247 AC004233.3-201ENST00000607794 1269 ntBASIC14.32□□□□□ -0.12
RPS3AP61247 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPS3AP61247 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RPS3AP61247 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms