Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 AC099548.2-209ENST00000480264 625 ntBASIC17.41■□□□□ 0.38
CHMP4BP1P59074 AC108725.1-201ENST00000495472 409 ntBASIC17.41■□□□□ 0.38
CHMP4BP1P59074 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 AC243960.2-201ENST00000600996 747 ntBASIC17.41■□□□□ 0.38
CHMP4BP1P59074 MIR6869-201ENST00000619434 62 ntBASIC17.41■□□□□ 0.38
CHMP4BP1P59074 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHMP4BP1P59074 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 DRD5P1-201ENST00000456605 1438 ntBASIC17.4■□□□□ 0.38
CHMP4BP1P59074 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AC245100.3-201ENST00000441281 285 ntBASIC17.4■□□□□ 0.38
CHMP4BP1P59074 RPL13AP20-201ENST00000459725 609 ntBASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 RNA5SP412-201ENST00000516234 123 ntBASIC17.4■□□□□ 0.38
CHMP4BP1P59074 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 MIR6787-201ENST00000616675 61 ntBASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP4BP1P59074 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHMP4BP1P59074 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP4BP1P59074 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms