Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH15P55291 AL031432.2-201ENST00000566714 459 ntBASIC14.25□□□□□ -0.13
CDH15P55291 AL928711.1-201ENST00000570165 459 ntBASIC14.25□□□□□ -0.13
CDH15P55291 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 AL645728.2-201ENST00000641974 660 ntBASIC14.25□□□□□ -0.13
CDH15P55291 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH15P55291 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH15P55291 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH15P55291 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH15P55291 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CDH15P55291 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RFPL4AP1-201ENST00000530883 850 ntBASIC14.24□□□□□ -0.13
CDH15P55291 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.24□□□□□ -0.13
CDH15P55291 AP002472.1-201ENST00000577490 586 ntBASIC14.24□□□□□ -0.13
CDH15P55291 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDH15P55291 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH15P55291 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH15P55291 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH15P55291 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH15P55291 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDH15P55291 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH15P55291 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH15P55291 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH15P55291 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CDH15P55291 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH15P55291 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH15P55291 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH15P55291 HMGA1P7-201ENST00000406908 502 ntBASIC14.23□□□□□ -0.13
CDH15P55291 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH15P55291 PMS2P4-201ENST00000412466 1052 ntBASIC14.23□□□□□ -0.13
CDH15P55291 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
CDH15P55291 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms