Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AP003171.2-201ENST00000528208 925 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 AC106820.3-201ENST00000561653 397 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 AC138696.2-201ENST00000607376 223 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.55■□□□□ 0.24
NCKAP1LP55160 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 AL136379.1-201ENST00000623471 2642 ntBASIC16.55■□□□□ 0.24
NCKAP1LP55160 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCKAP1LP55160 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC003102.2-201ENST00000589195 1469 ntBASIC16.54■□□□□ 0.24
NCKAP1LP55160 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 IGHV3-71-201ENST00000523324 359 ntBASIC16.54■□□□□ 0.24
NCKAP1LP55160 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC017083.2-201ENST00000608069 979 ntBASIC16.54■□□□□ 0.24
NCKAP1LP55160 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
NCKAP1LP55160 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1LP55160 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 LINC01101-201ENST00000622953 1884 ntBASIC16.53■□□□□ 0.24
NCKAP1LP55160 GK-202ENST00000378941 458 ntTSL 3 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 TLE1P1-201ENST00000422965 589 ntBASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AL391280.1-201ENST00000506969 1062 ntBASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC018442.1-201ENST00000421439 2061 ntBASIC16.53■□□□□ 0.24
NCKAP1LP55160 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1LP55160 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1LP55160 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1LP55160 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1LP55160 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms