Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 FAM86MP-201ENST00000340703 885 ntBASIC14.18□□□□□ -0.14
EFNA3P52797 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
EFNA3P52797 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
EFNA3P52797 AC245100.3-201ENST00000441281 285 ntBASIC14.18□□□□□ -0.14
EFNA3P52797 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 RPL13AP20-201ENST00000459725 609 ntBASIC14.18□□□□□ -0.14
EFNA3P52797 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 MIR4538-201ENST00000581377 78 ntBASIC14.18□□□□□ -0.14
EFNA3P52797 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
EFNA3P52797 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EFNA3P52797 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNA3P52797 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNA3P52797 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 AC006486.2-201ENST00000624246 2199 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 AHCYP2-201ENST00000430630 1300 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 INE2-201ENST00000630399 1874 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 AC092658.1-201ENST00000505836 891 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.17□□□□□ -0.14
EFNA3P52797 AL391280.1-201ENST00000506969 1062 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.17□□□□□ -0.14
EFNA3P52797 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
EFNA3P52797 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.17□□□□□ -0.14
EFNA3P52797 MIR4741-201ENST00000579822 90 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AC022532.1-201ENST00000624563 1728 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 LILRP1-201ENST00000444199 1370 ntBASIC14.17□□□□□ -0.14
EFNA3P52797 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
EFNA3P52797 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
EFNA3P52797 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
EFNA3P52797 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms