Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LHX2P50458 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LHX2P50458 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
LHX2P50458 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 MIR326-201ENST00000362220 95 ntBASIC13.49□□□□□ -0.25
LHX2P50458 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 MIR4538-201ENST00000581377 78 ntBASIC13.49□□□□□ -0.25
LHX2P50458 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.49□□□□□ -0.25
LHX2P50458 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.49□□□□□ -0.25
LHX2P50458 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LHX2P50458 AL023775.1-201ENST00000454907 1746 ntBASIC13.49□□□□□ -0.25
LHX2P50458 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LHX2P50458 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LHX2P50458 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 ACE3P-201ENST00000423435 1973 ntBASIC13.49□□□□□ -0.25
LHX2P50458 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LHX2P50458 AC011840.2-201ENST00000563063 1520 ntBASIC13.49□□□□□ -0.25
LHX2P50458 AC015818.8-201ENST00000587907 1519 ntBASIC13.49□□□□□ -0.25
LHX2P50458 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.49□□□□□ -0.25
LHX2P50458 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
LHX2P50458 KRT8P4-201ENST00000509735 1454 ntBASIC13.48□□□□□ -0.25
LHX2P50458 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 AL136309.1-201ENST00000403917 691 ntBASIC13.48□□□□□ -0.25
LHX2P50458 RN7SKP175-201ENST00000408472 289 ntBASIC13.48□□□□□ -0.25
LHX2P50458 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.48□□□□□ -0.25
LHX2P50458 AC004945.1-201ENST00000416738 983 ntBASIC13.48□□□□□ -0.25
LHX2P50458 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 MTX1P1-201ENST00000440904 838 ntBASIC13.48□□□□□ -0.25
LHX2P50458 CHMP1AP1-201ENST00000445563 662 ntBASIC13.48□□□□□ -0.25
LHX2P50458 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.48□□□□□ -0.25
LHX2P50458 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.48□□□□□ -0.25
LHX2P50458 AC126177.1-201ENST00000547829 2218 ntBASIC13.48□□□□□ -0.25
LHX2P50458 INE2-201ENST00000630399 1874 ntBASIC13.48□□□□□ -0.25
LHX2P50458 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.48□□□□□ -0.25
LHX2P50458 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LHX2P50458 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LHX2P50458 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms