Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.64■□□□□ 0.25
CPT1AP50416 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.63■□□□□ 0.25
CPT1AP50416 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.63■□□□□ 0.25
CPT1AP50416 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPT1AP50416 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CPT1AP50416 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 AC087481.3-201ENST00000602886 1894 ntBASIC16.63■□□□□ 0.25
CPT1AP50416 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPT1AP50416 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CPT1AP50416 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.63■□□□□ 0.25
CPT1AP50416 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CPT1AP50416 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.63■□□□□ 0.25
CPT1AP50416 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.63■□□□□ 0.25
CPT1AP50416 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.63■□□□□ 0.25
CPT1AP50416 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.63■□□□□ 0.25
CPT1AP50416 MIR6720-201ENST00000611664 98 ntBASIC16.63■□□□□ 0.25
CPT1AP50416 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.63■□□□□ 0.25
CPT1AP50416 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.63■□□□□ 0.25
CPT1AP50416 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 FAM90A7P-201ENST00000382628 1395 ntBASIC16.63■□□□□ 0.25
CPT1AP50416 FAM90A23P-201ENST00000400136 1395 ntBASIC16.63■□□□□ 0.25
CPT1AP50416 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.63■□□□□ 0.25
CPT1AP50416 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
CPT1AP50416 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPT1AP50416 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 AL365203.3-201ENST00000609742 2057 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 PDIA3P2-201ENST00000428073 158 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.62■□□□□ 0.25
CPT1AP50416 RTN3P1-201ENST00000536295 711 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC103988.2-201ENST00000561804 725 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC005962.1-201ENST00000584100 773 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 AC012044.1-201ENST00000603431 297 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 MIR6727-201ENST00000620702 65 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 Z98259.2-201ENST00000641583 609 ntBASIC16.62■□□□□ 0.25
CPT1AP50416 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPT1AP50416 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.62■□□□□ 0.25
CPT1AP50416 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPT1AP50416 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms