Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 TCAF1P1-201ENST00000414990 2232 ntBASIC12.07□□□□□ -0.48
CDC34P49427 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 FOXO1B-201ENST00000504678 1527 ntBASIC12.06□□□□□ -0.48
CDC34P49427 CICP8-201ENST00000455800 2813 ntBASIC12.06□□□□□ -0.48
CDC34P49427 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 HCG4B-203ENST00000450128 991 ntBASIC12.06□□□□□ -0.48
CDC34P49427 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 UNC93B6-202ENST00000528242 690 ntBASIC12.06□□□□□ -0.48
CDC34P49427 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 AL138918.1-201ENST00000568306 659 ntBASIC12.06□□□□□ -0.48
CDC34P49427 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.06□□□□□ -0.48
CDC34P49427 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 REXO1L1P-201ENST00000379010 6598 ntBASIC12.06□□□□□ -0.48
CDC34P49427 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CDC34P49427 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CDC34P49427 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CDC34P49427 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CDC34P49427 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 REXO1L4P-201ENST00000605109 1937 ntBASIC12.05□□□□□ -0.48
CDC34P49427 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.05□□□□□ -0.48
CDC34P49427 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC34P49427 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC34P49427 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 FAM220BP-201ENST00000377689 816 ntBASIC12.05□□□□□ -0.48
CDC34P49427 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 AZGP1P1-201ENST00000411909 902 ntBASIC12.05□□□□□ -0.48
CDC34P49427 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC34P49427 HNRNPDP1-201ENST00000439535 754 ntBASIC12.05□□□□□ -0.48
CDC34P49427 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.05□□□□□ -0.48
CDC34P49427 AC018712.1-201ENST00000455767 687 ntBASIC12.05□□□□□ -0.48
CDC34P49427 AF186996.4-201ENST00000467186 377 ntBASIC12.05□□□□□ -0.48
CDC34P49427 AC092910.1-201ENST00000482027 1129 ntBASIC12.05□□□□□ -0.48
CDC34P49427 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms