Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 AL136309.1-201ENST00000403917 691 ntBASIC15.99■□□□□ 0.15
LHX1P48742 MIR1908-201ENST00000410394 80 ntBASIC15.99■□□□□ 0.15
LHX1P48742 AC092658.1-201ENST00000505836 891 ntBASIC15.99■□□□□ 0.15
LHX1P48742 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.99■□□□□ 0.15
LHX1P48742 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.99■□□□□ 0.15
LHX1P48742 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX1P48742 MIR4741-201ENST00000579822 90 ntBASIC15.99■□□□□ 0.15
LHX1P48742 PPY2P-201ENST00000582808 702 ntBASIC15.99■□□□□ 0.15
LHX1P48742 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX1P48742 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LHX1P48742 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LHX1P48742 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.99■□□□□ 0.15
LHX1P48742 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LHX1P48742 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LHX1P48742 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 ACE3P-201ENST00000423435 1973 ntBASIC15.98■□□□□ 0.15
LHX1P48742 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 AL138725.1-201ENST00000407347 1314 ntBASIC15.98■□□□□ 0.15
LHX1P48742 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 AC004945.1-201ENST00000416738 983 ntBASIC15.98■□□□□ 0.15
LHX1P48742 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.98■□□□□ 0.15
LHX1P48742 AC007969.1-201ENST00000433675 447 ntBASIC15.98■□□□□ 0.15
LHX1P48742 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.98■□□□□ 0.15
LHX1P48742 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.98■□□□□ 0.15
LHX1P48742 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.98■□□□□ 0.15
LHX1P48742 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LHX1P48742 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 AC015818.8-201ENST00000587907 1519 ntBASIC15.98■□□□□ 0.15
LHX1P48742 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.98■□□□□ 0.15
LHX1P48742 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
LHX1P48742 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LHX1P48742 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.98■□□□□ 0.15
LHX1P48742 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 KRT8P4-201ENST00000509735 1454 ntBASIC15.97■□□□□ 0.15
LHX1P48742 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 RN7SKP175-201ENST00000408472 289 ntBASIC15.97■□□□□ 0.15
LHX1P48742 BTBD6P1-201ENST00000412176 1267 ntBASIC15.97■□□□□ 0.15
LHX1P48742 AC079178.1-201ENST00000420915 656 ntBASIC15.97■□□□□ 0.15
LHX1P48742 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 PFN1P12-201ENST00000455938 534 ntBASIC15.97■□□□□ 0.15
LHX1P48742 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LHX1P48742 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 FAM86HP-204ENST00000513466 959 ntBASIC15.97■□□□□ 0.15
LHX1P48742 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LHX1P48742 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.97■□□□□ 0.15
LHX1P48742 RN7SL219P-201ENST00000582872 296 ntBASIC15.97■□□□□ 0.15
LHX1P48742 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.97■□□□□ 0.15
LHX1P48742 AC244157.2-201ENST00000616239 1006 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms