Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.55□□□□□ -0.24
CSNK1A1P48729 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
CSNK1A1P48729 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CSNK1A1P48729 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.54□□□□□ -0.24
CSNK1A1P48729 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 SPDYE22P-201ENST00000582158 798 ntBASIC13.54□□□□□ -0.24
CSNK1A1P48729 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 LILRP1-201ENST00000444199 1370 ntBASIC13.54□□□□□ -0.24
CSNK1A1P48729 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.54□□□□□ -0.24
CSNK1A1P48729 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1A1P48729 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1A1P48729 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AJ011931.1-201ENST00000618749 2492 ntBASIC13.53□□□□□ -0.24
CSNK1A1P48729 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AL162726.2-201ENST00000438986 1017 ntBASIC13.53□□□□□ -0.24
CSNK1A1P48729 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms