Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.31□□□□□ -0.12
GABRA4P48169 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 ZBED1P1-201ENST00000502364 1930 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
GABRA4P48169 AC003102.2-201ENST00000589195 1469 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 ACE3P-201ENST00000423435 1973 ntBASIC14.31□□□□□ -0.12
GABRA4P48169 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
GABRA4P48169 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GABRA4P48169 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
GABRA4P48169 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 AC079178.1-201ENST00000420915 656 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 MTX1P1-201ENST00000440904 838 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 PFN1P12-201ENST00000455938 534 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.3□□□□□ -0.12
GABRA4P48169 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 MIR4683-201ENST00000579659 81 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 MIR4525-201ENST00000580000 75 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 AC091271.1-201ENST00000611877 1162 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 AC005695.3-201ENST00000614522 232 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 AL096828.3-201ENST00000615354 462 ntBASIC14.3□□□□□ -0.12
GABRA4P48169 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
GABRA4P48169 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
GABRA4P48169 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.3□□□□□ -0.12
GABRA4P48169 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GABRA4P48169 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GABRA4P48169 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
GABRA4P48169 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.29□□□□□ -0.12
GABRA4P48169 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GABRA4P48169 MIR663B-201ENST00000408361 115 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 AC007969.1-201ENST00000433675 447 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms