Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.46■□□□□ 0.55
PDE6BP35913 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDE6BP35913 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.46■□□□□ 0.55
PDE6BP35913 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 BX088702.1-201ENST00000610784 235 ntBASIC18.46■□□□□ 0.55
PDE6BP35913 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.46■□□□□ 0.55
PDE6BP35913 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDE6BP35913 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
PDE6BP35913 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDE6BP35913 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.46■□□□□ 0.54
PDE6BP35913 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDE6BP35913 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDE6BP35913 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 AC097065.1-201ENST00000425737 517 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.45■□□□□ 0.54
PDE6BP35913 AL035414.1-201ENST00000451327 857 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 AP000358.1-201ENST00000456260 156 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.45■□□□□ 0.54
PDE6BP35913 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 IGHV3-37-201ENST00000518544 340 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDE6BP35913 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDE6BP35913 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDE6BP35913 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.45■□□□□ 0.54
PDE6BP35913 AC024909.3-201ENST00000611513 2257 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PDE6BP35913 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.45■□□□□ 0.54
PDE6BP35913 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 AC003102.2-201ENST00000589195 1469 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
PDE6BP35913 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDE6BP35913 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.45■□□□□ 0.54
PDE6BP35913 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6BP35913 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PDE6BP35913 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
PDE6BP35913 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDE6BP35913 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.44■□□□□ 0.54
PDE6BP35913 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.44■□□□□ 0.54
PDE6BP35913 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.44■□□□□ 0.54
PDE6BP35913 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.44■□□□□ 0.54
PDE6BP35913 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.44■□□□□ 0.54
PDE6BP35913 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms