Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.96□□□□□ -0.17
SHC1P29353 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.96□□□□□ -0.17
SHC1P29353 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SHC1P29353 AL359711.2-201ENST00000563105 872 ntBASIC13.96□□□□□ -0.17
SHC1P29353 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.96□□□□□ -0.17
SHC1P29353 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.96□□□□□ -0.17
SHC1P29353 WFDC1-204ENST00000613603 549 ntBASIC13.96□□□□□ -0.17
SHC1P29353 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.96□□□□□ -0.17
SHC1P29353 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.96□□□□□ -0.17
SHC1P29353 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SHC1P29353 DRD5P1-201ENST00000456605 1438 ntBASIC13.96□□□□□ -0.18
SHC1P29353 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SHC1P29353 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
SHC1P29353 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SHC1P29353 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SHC1P29353 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.96□□□□□ -0.18
SHC1P29353 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 AC005840.4-201ENST00000541242 2494 ntBASIC13.95□□□□□ -0.18
SHC1P29353 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 COX20P2-201ENST00000452636 358 ntBASIC13.95□□□□□ -0.18
SHC1P29353 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.95□□□□□ -0.18
SHC1P29353 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.95□□□□□ -0.18
SHC1P29353 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.95□□□□□ -0.18
SHC1P29353 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.95□□□□□ -0.18
SHC1P29353 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.95□□□□□ -0.18
SHC1P29353 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 TMEM261P1-201ENST00000604899 340 ntBASIC13.95□□□□□ -0.18
SHC1P29353 AC107373.2-201ENST00000607735 490 ntBASIC13.95□□□□□ -0.18
SHC1P29353 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.95□□□□□ -0.18
SHC1P29353 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SHC1P29353 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SHC1P29353 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms