Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.16■□□□□ 0.02
HTR1BP28222 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
HTR1BP28222 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.16■□□□□ 0.02
HTR1BP28222 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HTR1BP28222 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.16■□□□□ 0.02
HTR1BP28222 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
HTR1BP28222 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.16■□□□□ 0.02
HTR1BP28222 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HTR1BP28222 CICP24-201ENST00000605464 2705 ntBASIC15.16■□□□□ 0.02
HTR1BP28222 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 AC006486.2-201ENST00000624246 2199 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 AC126755.1-201ENST00000525846 6405 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 RNU1-114P-201ENST00000365297 166 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 CNN2P8-201ENST00000421872 913 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 SAMD11P1-201ENST00000571429 661 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.15■□□□□ 0.02
HTR1BP28222 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 AL033527.4-201ENST00000641026 673 ntBASIC15.15■□□□□ 0.02
HTR1BP28222 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HTR1BP28222 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
HTR1BP28222 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.15■□□□□ 0.02
HTR1BP28222 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
HTR1BP28222 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HTR1BP28222 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HTR1BP28222 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HTR1BP28222 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 CICP4-201ENST00000447359 2812 ntBASIC15.14■□□□□ 0.01
HTR1BP28222 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.14■□□□□ 0.01
HTR1BP28222 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.14■□□□□ 0.01
HTR1BP28222 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HTR1BP28222 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.14■□□□□ 0.01
HTR1BP28222 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HTR1BP28222 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HTR1BP28222 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms