Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.32■□□□□ 0.2
CD58P19256 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD58P19256 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD58P19256 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 AL137783.1-201ENST00000623494 1896 ntBASIC16.31■□□□□ 0.2
CD58P19256 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CD58P19256 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 AL645937.2-201ENST00000396808 931 ntBASIC16.31■□□□□ 0.2
CD58P19256 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CD58P19256 AL139094.1-201ENST00000405549 1188 ntBASIC16.31■□□□□ 0.2
CD58P19256 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 NUS1P3-201ENST00000423502 862 ntBASIC16.31■□□□□ 0.2
CD58P19256 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.31■□□□□ 0.2
CD58P19256 KRT17P7-201ENST00000451704 1104 ntBASIC16.31■□□□□ 0.2
CD58P19256 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CD58P19256 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 AP005019.2-201ENST00000615104 511 ntBASIC16.31■□□□□ 0.2
CD58P19256 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.31■□□□□ 0.2
CD58P19256 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD58P19256 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.3■□□□□ 0.2
CD58P19256 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 LILRP1-201ENST00000444199 1370 ntBASIC16.3■□□□□ 0.2
CD58P19256 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.3■□□□□ 0.2
CD58P19256 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.3■□□□□ 0.2
CD58P19256 ACTG1P3-201ENST00000431775 1114 ntBASIC16.3■□□□□ 0.2
CD58P19256 AC007389.4-201ENST00000454674 793 ntBASIC16.3■□□□□ 0.2
CD58P19256 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD58P19256 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.3■□□□□ 0.2
CD58P19256 PTP4A1P2-201ENST00000546033 454 ntBASIC16.3■□□□□ 0.2
CD58P19256 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.3■□□□□ 0.2
CD58P19256 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.3■□□□□ 0.2
CD58P19256 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.3■□□□□ 0.2
CD58P19256 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 PRSS30P-206ENST00000641773 873 ntBASIC16.3■□□□□ 0.2
CD58P19256 AJ011931.1-201ENST00000618749 2492 ntBASIC16.3■□□□□ 0.2
CD58P19256 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.3■□□□□ 0.2
CD58P19256 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD58P19256 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD58P19256 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD58P19256 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms