Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.06□□□□□ -0.48
CSN3P07498 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.06□□□□□ -0.48
CSN3P07498 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CSN3P07498 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CSN3P07498 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.05□□□□□ -0.48
CSN3P07498 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.05□□□□□ -0.48
CSN3P07498 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.05□□□□□ -0.48
CSN3P07498 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.05□□□□□ -0.48
CSN3P07498 SPDYE18-201ENST00000510091 1050 ntBASIC12.05□□□□□ -0.48
CSN3P07498 DOC2GP-202ENST00000514950 1163 ntBASIC12.05□□□□□ -0.48
CSN3P07498 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.05□□□□□ -0.48
CSN3P07498 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.05□□□□□ -0.48
CSN3P07498 TIMM17BP1-201ENST00000545713 516 ntBASIC12.05□□□□□ -0.48
CSN3P07498 HNRNPUP1-201ENST00000554987 333 ntBASIC12.05□□□□□ -0.48
CSN3P07498 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 AC020658.6-201ENST00000623564 1870 ntBASIC12.05□□□□□ -0.48
CSN3P07498 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 LINC00528-201ENST00000600723 2160 ntBASIC12.05□□□□□ -0.48
CSN3P07498 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.05□□□□□ -0.48
CSN3P07498 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.05□□□□□ -0.48
CSN3P07498 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSN3P07498 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CSN3P07498 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.04□□□□□ -0.48
CSN3P07498 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.04□□□□□ -0.48
CSN3P07498 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CSN3P07498 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.04□□□□□ -0.48
CSN3P07498 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSN3P07498 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms