Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPNS1P04632 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPNS1P04632 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPNS1P04632 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPNS1P04632 U82695.1-201ENST00000635752 1889 ntBASIC15.14■□□□□ 0.01
CAPNS1P04632 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPNS1P04632 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CAPNS1P04632 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPNS1P04632 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CAPNS1P04632 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 CNN2P8-201ENST00000421872 913 ntBASIC15.13■□□□□ 0.01
CAPNS1P04632 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.13■□□□□ 0.01
CAPNS1P04632 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 AC004898.1-201ENST00000451057 766 ntBASIC15.13■□□□□ 0.01
CAPNS1P04632 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CAPNS1P04632 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 SCARNA20.5-201ENST00000516991 142 ntBASIC15.13■□□□□ 0.01
CAPNS1P04632 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.13■□□□□ 0.01
CAPNS1P04632 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CAPNS1P04632 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPNS1P04632 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPNS1P04632 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CAPNS1P04632 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC091046.1-201ENST00000331871 207 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 FNTAP2-201ENST00000430308 634 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC012441.1-201ENST00000446669 685 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC091804.1-201ENST00000486888 567 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CAPNS1P04632 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.12■□□□□ 0.01
CAPNS1P04632 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPNS1P04632 AL049840.4-201ENST00000602422 811 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 LINC01115-203ENST00000606068 577 ntBASIC15.12■□□□□ 0.01
CAPNS1P04632 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CAPNS1P04632 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPNS1P04632 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPNS1P04632 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms