Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDGFBP01127 AC069224.1-201ENST00000566372 1715 ntBASIC15□□□□□ -0.01
PDGFBP01127 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PDGFBP01127 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDGFBP01127 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 DPY19L2P5-201ENST00000456300 331 ntBASIC14.99□□□□□ -0.01
PDGFBP01127 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDGFBP01127 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFBP01127 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFBP01127 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 MIR3188-201ENST00000583494 85 ntBASIC14.99□□□□□ -0.01
PDGFBP01127 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 PEBP1P2-201ENST00000603980 558 ntBASIC14.99□□□□□ -0.01
PDGFBP01127 AL139339.2-201ENST00000608063 657 ntBASIC14.99□□□□□ -0.01
PDGFBP01127 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFBP01127 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFBP01127 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
PDGFBP01127 FAM90A21P-201ENST00000510875 1396 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A15P-201ENST00000514465 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A6P-201ENST00000515148 1394 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A16P-201ENST00000526662 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A9P-201ENST00000527940 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A5P-201ENST00000528738 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A14P-201ENST00000530386 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 FAM90A13P-201ENST00000534703 1395 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AC018629.1-201ENST00000623381 1736 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDGFBP01127 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDGFBP01127 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFBP01127 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFBP01127 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 AC133540.1-201ENST00000620845 1019 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AC027601.3-201ENST00000622907 509 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFBP01127 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 AL596087.1-201ENST00000400979 1969 ntBASIC14.98□□□□□ -0.01
PDGFBP01127 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFBP01127 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFBP01127 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms