Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CBX6O95503 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.24■□□□□ 0.03
CBX6O95503 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CBX6O95503 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.24■□□□□ 0.03
CBX6O95503 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CBX6O95503 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX6O95503 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX6O95503 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CBX6O95503 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CBX6O95503 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.23■□□□□ 0.03
CBX6O95503 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.23■□□□□ 0.03
CBX6O95503 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CBX6O95503 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 AL009183.1-201ENST00000603760 355 ntBASIC15.23■□□□□ 0.03
CBX6O95503 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 AL008721.1-201ENST00000609964 604 ntBASIC15.23■□□□□ 0.03
CBX6O95503 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CBX6O95503 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CBX6O95503 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.23■□□□□ 0.03
CBX6O95503 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CBX6O95503 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 AC011474.4-201ENST00000623523 2076 ntBASIC15.22■□□□□ 0.03
CBX6O95503 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CBX6O95503 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
CBX6O95503 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CBX6O95503 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CBX6O95503 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.22■□□□□ 0.03
CBX6O95503 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms