Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX4O95219 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX4O95219 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.37□□□□□ -0.11
SNX4O95219 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX4O95219 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 AC025048.6-201ENST00000634326 1161 ntBASIC14.37□□□□□ -0.11
SNX4O95219 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SNX4O95219 AC105233.6-201ENST00000642093 218 ntBASIC14.37□□□□□ -0.11
SNX4O95219 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
SNX4O95219 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX4O95219 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX4O95219 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNX4O95219 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX4O95219 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SNX4O95219 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 AC091951.1-201ENST00000512854 2465 ntBASIC14.36□□□□□ -0.11
SNX4O95219 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SNX4O95219 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX4O95219 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX4O95219 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNX4O95219 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX4O95219 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SNX4O95219 AL158212.4-201ENST00000624062 1286 ntBASIC14.36□□□□□ -0.11
SNX4O95219 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNX4O95219 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX4O95219 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX4O95219 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNX4O95219 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SNX4O95219 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SNX4O95219 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 AL122018.1-201ENST00000446607 2310 ntBASIC14.35□□□□□ -0.11
SNX4O95219 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX4O95219 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 AC098614.1-201ENST00000368528 745 ntBASIC14.35□□□□□ -0.11
SNX4O95219 RN7SL399P-201ENST00000471648 279 ntBASIC14.35□□□□□ -0.11
SNX4O95219 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNX4O95219 AC123567.1-201ENST00000548294 1261 ntBASIC14.35□□□□□ -0.11
SNX4O95219 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.35□□□□□ -0.11
SNX4O95219 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX4O95219 CHCHD2P3-201ENST00000603038 451 ntBASIC14.35□□□□□ -0.11
SNX4O95219 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.35□□□□□ -0.11
SNX4O95219 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms