Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 RN7SL837P-201ENST00000463010 287 ntBASIC13.97□□□□□ -0.17
NKX2-2O95096 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 AC068587.3-201ENST00000526613 355 ntBASIC13.97□□□□□ -0.17
NKX2-2O95096 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 LINC00552-201ENST00000625151 2579 ntBASIC13.97□□□□□ -0.17
NKX2-2O95096 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NKX2-2O95096 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX2-2O95096 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX2-2O95096 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 RN7SL692P-201ENST00000464677 288 ntBASIC13.96□□□□□ -0.17
NKX2-2O95096 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX2-2O95096 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX2-2O95096 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX2-2O95096 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
NKX2-2O95096 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.96□□□□□ -0.18
NKX2-2O95096 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NKX2-2O95096 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.96□□□□□ -0.18
NKX2-2O95096 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX2-2O95096 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NKX2-2O95096 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 AC140479.7-201ENST00000636301 2332 ntBASIC13.95□□□□□ -0.18
NKX2-2O95096 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX2-2O95096 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms