Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST1O76090 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
BEST1O76090 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 AC011840.2-201ENST00000563063 1520 ntBASIC15.85■□□□□ 0.13
BEST1O76090 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST1O76090 FAM21FP-201ENST00000426241 1131 ntBASIC15.85■□□□□ 0.13
BEST1O76090 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 AP006547.1-201ENST00000563435 692 ntBASIC15.85■□□□□ 0.13
BEST1O76090 AC010328.2-201ENST00000597698 1111 ntBASIC15.85■□□□□ 0.13
BEST1O76090 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.85■□□□□ 0.13
BEST1O76090 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.85■□□□□ 0.13
BEST1O76090 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
BEST1O76090 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
BEST1O76090 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BEST1O76090 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BEST1O76090 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
BEST1O76090 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST1O76090 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
BEST1O76090 RPL13AP20-201ENST00000459725 609 ntBASIC15.84■□□□□ 0.13
BEST1O76090 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST1O76090 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST1O76090 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
BEST1O76090 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST1O76090 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST1O76090 RN7SL713P-201ENST00000582127 302 ntBASIC15.84■□□□□ 0.13
BEST1O76090 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.84■□□□□ 0.13
BEST1O76090 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.84■□□□□ 0.13
BEST1O76090 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST1O76090 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BEST1O76090 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.84■□□□□ 0.13
BEST1O76090 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
BEST1O76090 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 AC003102.2-201ENST00000589195 1469 ntBASIC15.84■□□□□ 0.13
BEST1O76090 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BEST1O76090 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.83■□□□□ 0.13
BEST1O76090 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BEST1O76090 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.83■□□□□ 0.13
BEST1O76090 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 MIR1908-201ENST00000410394 80 ntBASIC15.83■□□□□ 0.12
BEST1O76090 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BEST1O76090 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.83■□□□□ 0.12
BEST1O76090 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.83■□□□□ 0.12
BEST1O76090 AC138696.2-201ENST00000607376 223 ntBASIC15.83■□□□□ 0.12
BEST1O76090 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
BEST1O76090 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms