Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.92□□□□□ -0.5
ZNF253O75346 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ZNF253O75346 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ZNF253O75346 HSPA7-201ENST00000445535 1927 ntBASIC11.92□□□□□ -0.5
ZNF253O75346 BX640514.1-201ENST00000583223 1918 ntBASIC11.92□□□□□ -0.5
ZNF253O75346 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 IL9RP2-201ENST00000423948 1312 ntBASIC11.91□□□□□ -0.5
ZNF253O75346 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ZNF253O75346 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 FAM58CP-201ENST00000435741 640 ntBASIC11.91□□□□□ -0.5
ZNF253O75346 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.91□□□□□ -0.5
ZNF253O75346 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.91□□□□□ -0.5
ZNF253O75346 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.91□□□□□ -0.5
ZNF253O75346 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 AL607033.1-201ENST00000623900 1599 ntBASIC11.91□□□□□ -0.5
ZNF253O75346 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.91□□□□□ -0.5
ZNF253O75346 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.91□□□□□ -0.5
ZNF253O75346 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ZNF253O75346 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
ZNF253O75346 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
ZNF253O75346 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.9□□□□□ -0.5
ZNF253O75346 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms