Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LDB3O75112 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 GAPDHP21-201ENST00000450301 1010 ntBASIC14.29□□□□□ -0.12
LDB3O75112 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 USP32P1-208ENST00000506594 1164 ntBASIC14.29□□□□□ -0.12
LDB3O75112 AC106760.1-201ENST00000508690 800 ntBASIC14.29□□□□□ -0.12
LDB3O75112 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 SLC25A47P1-201ENST00000531577 414 ntBASIC14.29□□□□□ -0.12
LDB3O75112 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.29□□□□□ -0.12
LDB3O75112 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.29□□□□□ -0.12
LDB3O75112 AC015936.2-201ENST00000593177 259 ntBASIC14.29□□□□□ -0.12
LDB3O75112 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.29□□□□□ -0.12
LDB3O75112 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.28□□□□□ -0.12
LDB3O75112 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LDB3O75112 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.28□□□□□ -0.12
LDB3O75112 AL355864.2-201ENST00000447420 863 ntBASIC14.28□□□□□ -0.12
LDB3O75112 BCRP2-202ENST00000447763 634 ntBASIC14.28□□□□□ -0.12
LDB3O75112 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.28□□□□□ -0.12
LDB3O75112 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.28□□□□□ -0.12
LDB3O75112 BCRP6-201ENST00000510112 632 ntBASIC14.28□□□□□ -0.12
LDB3O75112 BCRP7-201ENST00000511549 544 ntBASIC14.28□□□□□ -0.12
LDB3O75112 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 AP001889.1-201ENST00000525414 633 ntBASIC14.28□□□□□ -0.12
LDB3O75112 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LDB3O75112 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.28□□□□□ -0.12
LDB3O75112 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.28□□□□□ -0.12
LDB3O75112 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 AC055811.4-201ENST00000624039 1754 ntBASIC14.28□□□□□ -0.12
LDB3O75112 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.28□□□□□ -0.12
LDB3O75112 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LDB3O75112 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LDB3O75112 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms