Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC015656.1-201ENST00000624209 3578 ntBASIC18.7■□□□□ 0.58
SMARCA5O60264 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC097359.2-201ENST00000604992 2389 ntBASIC18.7■□□□□ 0.58
SMARCA5O60264 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCA5O60264 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCA5O60264 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCA5O60264 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMARCA5O60264 AC106760.1-201ENST00000508690 800 ntBASIC18.69■□□□□ 0.58
SMARCA5O60264 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.69■□□□□ 0.58
SMARCA5O60264 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 AC105233.6-201ENST00000642093 218 ntBASIC18.69■□□□□ 0.58
SMARCA5O60264 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 KRT8P35-201ENST00000483942 1338 ntBASIC18.69■□□□□ 0.58
SMARCA5O60264 AC134312.5-201ENST00000568031 1313 ntBASIC18.69■□□□□ 0.58
SMARCA5O60264 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SMARCA5O60264 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMARCA5O60264 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMARCA5O60264 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCA5O60264 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SMARCA5O60264 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 ACKR1-201ENST00000368121 1240 ntBASIC18.68■□□□□ 0.58
SMARCA5O60264 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCA5O60264 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCA5O60264 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCA5O60264 ACTG1P3-201ENST00000431775 1114 ntBASIC18.68■□□□□ 0.58
SMARCA5O60264 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.68■□□□□ 0.58
SMARCA5O60264 AC022616.1-201ENST00000518688 554 ntBASIC18.68■□□□□ 0.58
SMARCA5O60264 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCA5O60264 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
SMARCA5O60264 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SMARCA5O60264 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.68■□□□□ 0.58
SMARCA5O60264 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SMARCA5O60264 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMARCA5O60264 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCA5O60264 SNX18-202ENST00000343017 3140 ntBASIC18.67■□□□□ 0.58
SMARCA5O60264 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms