Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
XRCC2O43543 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 NUS1P3-201ENST00000423502 862 ntBASIC13.25□□□□□ -0.29
XRCC2O43543 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 AC026410.3-201ENST00000514280 936 ntBASIC13.25□□□□□ -0.29
XRCC2O43543 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.25□□□□□ -0.29
XRCC2O43543 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.25□□□□□ -0.29
XRCC2O43543 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.25□□□□□ -0.29
XRCC2O43543 AC093813.1-201ENST00000605066 256 ntBASIC13.25□□□□□ -0.29
XRCC2O43543 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 AC107373.2-201ENST00000607735 490 ntBASIC13.25□□□□□ -0.29
XRCC2O43543 AC099568.2-201ENST00000609194 695 ntBASIC13.25□□□□□ -0.29
XRCC2O43543 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
XRCC2O43543 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.25□□□□□ -0.29
XRCC2O43543 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.25□□□□□ -0.29
XRCC2O43543 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
XRCC2O43543 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.24□□□□□ -0.29
XRCC2O43543 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.24□□□□□ -0.29
XRCC2O43543 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.24□□□□□ -0.29
XRCC2O43543 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.24□□□□□ -0.29
XRCC2O43543 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
XRCC2O43543 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
XRCC2O43543 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.24□□□□□ -0.29
XRCC2O43543 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms