Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.52□□□□□ -0.08
CLOCKO15516 CYP4F24P-201ENST00000586049 1580 ntBASIC14.52□□□□□ -0.08
CLOCKO15516 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLOCKO15516 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.52□□□□□ -0.08
CLOCKO15516 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLOCKO15516 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLOCKO15516 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLOCKO15516 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.52□□□□□ -0.08
CLOCKO15516 AC018529.2-202ENST00000611482 3087 ntBASIC14.52□□□□□ -0.08
CLOCKO15516 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 MIR770-201ENST00000390219 98 ntBASIC14.52□□□□□ -0.09
CLOCKO15516 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.52□□□□□ -0.09
CLOCKO15516 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLOCKO15516 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.52□□□□□ -0.09
CLOCKO15516 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 AC105233.2-201ENST00000523697 349 ntBASIC14.52□□□□□ -0.09
CLOCKO15516 AC109322.1-201ENST00000524499 1264 ntBASIC14.52□□□□□ -0.09
CLOCKO15516 AF228730.5-201ENST00000530288 346 ntBASIC14.52□□□□□ -0.09
CLOCKO15516 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.52□□□□□ -0.09
CLOCKO15516 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.52□□□□□ -0.09
CLOCKO15516 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.52□□□□□ -0.09
CLOCKO15516 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CLOCKO15516 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CLOCKO15516 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.52□□□□□ -0.09
CLOCKO15516 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
CLOCKO15516 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLOCKO15516 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLOCKO15516 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 FOXO1B-201ENST00000504678 1527 ntBASIC14.51□□□□□ -0.09
CLOCKO15516 UXT-AS1-201ENST00000590504 1525 ntBASIC14.51□□□□□ -0.09
CLOCKO15516 AP000845.1-201ENST00000581677 2131 ntBASIC14.51□□□□□ -0.09
CLOCKO15516 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CLOCKO15516 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CLOCKO15516 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.51□□□□□ -0.09
CLOCKO15516 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.51□□□□□ -0.09
CLOCKO15516 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.51□□□□□ -0.09
CLOCKO15516 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.51□□□□□ -0.09
CLOCKO15516 AL607033.1-201ENST00000623900 1599 ntBASIC14.51□□□□□ -0.09
CLOCKO15516 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLOCKO15516 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms