Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC106730.1-201ENST00000566722 1090 ntBASIC10.45□□□□□ -0.74
NDUFA1O15239 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.45□□□□□ -0.74
NDUFA1O15239 AP000842.3-202ENST00000569238 1080 ntBASIC10.45□□□□□ -0.74
NDUFA1O15239 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.45□□□□□ -0.74
NDUFA1O15239 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.45□□□□□ -0.74
NDUFA1O15239 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.45□□□□□ -0.74
NDUFA1O15239 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.45□□□□□ -0.74
NDUFA1O15239 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
NDUFA1O15239 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.45□□□□□ -0.74
NDUFA1O15239 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
NDUFA1O15239 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
NDUFA1O15239 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 AMT-224ENST00000635808 1610 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 FOXO1B-201ENST00000504678 1527 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 AC107918.4-201ENST00000641966 3141 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
NDUFA1O15239 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.44□□□□□ -0.74
NDUFA1O15239 EEF1DP4-201ENST00000446006 880 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 TPT1P11-201ENST00000458482 498 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 HNRNPUP1-201ENST00000554987 333 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.44□□□□□ -0.74
NDUFA1O15239 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 AC055811.4-201ENST00000624039 1754 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 AL136982.4-201ENST00000437689 1740 ntBASIC10.44□□□□□ -0.74
NDUFA1O15239 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
NDUFA1O15239 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.44□□□□□ -0.74
NDUFA1O15239 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
NDUFA1O15239 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms