Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APAF1O14727 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.91■□□□□ 0.78
APAF1O14727 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
APAF1O14727 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.91■□□□□ 0.78
APAF1O14727 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APAF1O14727 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APAF1O14727 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.91■□□□□ 0.78
APAF1O14727 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.9■□□□□ 0.78
APAF1O14727 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.9■□□□□ 0.78
APAF1O14727 AC079776.1-201ENST00000401540 1152 ntBASIC19.9■□□□□ 0.78
APAF1O14727 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.9■□□□□ 0.78
APAF1O14727 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.9■□□□□ 0.78
APAF1O14727 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.9■□□□□ 0.78
APAF1O14727 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
APAF1O14727 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APAF1O14727 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.9■□□□□ 0.78
APAF1O14727 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.89■□□□□ 0.78
APAF1O14727 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APAF1O14727 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APAF1O14727 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.89■□□□□ 0.78
APAF1O14727 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
APAF1O14727 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APAF1O14727 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
APAF1O14727 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
APAF1O14727 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
APAF1O14727 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 AC112492.5-201ENST00000421897 457 ntBASIC19.89■□□□□ 0.77
APAF1O14727 CLUHP2-201ENST00000426660 1303 ntBASIC19.89■□□□□ 0.77
APAF1O14727 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.89■□□□□ 0.77
APAF1O14727 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
APAF1O14727 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 AL590640.2-201ENST00000457038 527 ntBASIC19.89■□□□□ 0.77
APAF1O14727 AC007551.1-201ENST00000457394 519 ntBASIC19.89■□□□□ 0.77
APAF1O14727 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.89■□□□□ 0.77
APAF1O14727 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 ENPP7P14-201ENST00000621765 1040 ntBASIC19.89■□□□□ 0.77
APAF1O14727 AC063926.2-201ENST00000623766 1308 ntBASIC19.89■□□□□ 0.77
APAF1O14727 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APAF1O14727 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.89■□□□□ 0.77
APAF1O14727 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
APAF1O14727 FER1L4-210ENST00000615531 5998 ntBASIC19.88■□□□□ 0.77
APAF1O14727 INE2-201ENST00000630399 1874 ntBASIC19.88■□□□□ 0.77
APAF1O14727 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
APAF1O14727 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.88■□□□□ 0.77
APAF1O14727 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
APAF1O14727 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
APAF1O14727 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APAF1O14727 LINC00552-201ENST00000625151 2579 ntBASIC19.88■□□□□ 0.77
APAF1O14727 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.88■□□□□ 0.77
APAF1O14727 FAM197Y7-201ENST00000432892 766 ntBASIC19.88■□□□□ 0.77
APAF1O14727 AC245100.3-201ENST00000441281 285 ntBASIC19.88■□□□□ 0.77
APAF1O14727 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
APAF1O14727 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
APAF1O14727 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms