Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.85■□□□□ 0.45
NFKBIEO00221 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NFKBIEO00221 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKBIEO00221 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.85■□□□□ 0.45
NFKBIEO00221 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKBIEO00221 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NFKBIEO00221 AC093826.1-201ENST00000508655 993 ntBASIC17.85■□□□□ 0.45
NFKBIEO00221 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
NFKBIEO00221 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 AL139339.2-201ENST00000608063 657 ntBASIC17.85■□□□□ 0.45
NFKBIEO00221 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.85■□□□□ 0.45
NFKBIEO00221 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.85■□□□□ 0.45
NFKBIEO00221 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.85■□□□□ 0.45
NFKBIEO00221 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NFKBIEO00221 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.84■□□□□ 0.45
NFKBIEO00221 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKBIEO00221 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NFKBIEO00221 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.84■□□□□ 0.45
NFKBIEO00221 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.84■□□□□ 0.45
NFKBIEO00221 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 RN7SL494P-201ENST00000461517 304 ntBASIC17.84■□□□□ 0.45
NFKBIEO00221 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.84■□□□□ 0.45
NFKBIEO00221 MME-218ENST00000625667 363 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKBIEO00221 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NFKBIEO00221 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.84■□□□□ 0.45
NFKBIEO00221 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKBIEO00221 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKBIEO00221 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKBIEO00221 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKBIEO00221 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.83■□□□□ 0.45
NFKBIEO00221 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKBIEO00221 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.83■□□□□ 0.45
NFKBIEO00221 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.83■□□□□ 0.45
NFKBIEO00221 AC025183.3-201ENST00000623526 1482 ntBASIC17.83■□□□□ 0.45
NFKBIEO00221 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.83■□□□□ 0.45
NFKBIEO00221 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKBIEO00221 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKBIEO00221 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.45
NFKBIEO00221 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
NFKBIEO00221 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NFKBIEO00221 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.83■□□□□ 0.44
NFKBIEO00221 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.83■□□□□ 0.44
NFKBIEO00221 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKBIEO00221 RPL18AP8-201ENST00000486071 528 ntBASIC17.83■□□□□ 0.44
NFKBIEO00221 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKBIEO00221 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.83■□□□□ 0.44
NFKBIEO00221 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.83■□□□□ 0.44
NFKBIEO00221 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKBIEO00221 AC006548.2-201ENST00000605217 529 ntBASIC17.83■□□□□ 0.44
NFKBIEO00221 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.83■□□□□ 0.44
NFKBIEO00221 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NFKBIEO00221 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
NFKBIEO00221 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms