Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 AC023310.1-201ENST00000554836 735 ntBASIC17.05■□□□□ 0.32
DDX39AO00148 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX39AO00148 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.05■□□□□ 0.32
DDX39AO00148 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.05■□□□□ 0.32
DDX39AO00148 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
DDX39AO00148 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 AC144831.1-201ENST00000573312 2656 ntBASIC17.04■□□□□ 0.32
DDX39AO00148 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 AL161772.1-201ENST00000610494 4412 ntBASIC17.04■□□□□ 0.32
DDX39AO00148 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX39AO00148 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 RPL13AP20-201ENST00000459725 609 ntBASIC17.04■□□□□ 0.32
DDX39AO00148 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 AC092658.1-201ENST00000505836 891 ntBASIC17.04■□□□□ 0.32
DDX39AO00148 DUX4L47-201ENST00000566374 394 ntBASIC17.04■□□□□ 0.32
DDX39AO00148 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.04■□□□□ 0.32
DDX39AO00148 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX39AO00148 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX39AO00148 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX39AO00148 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.04■□□□□ 0.32
DDX39AO00148 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.04■□□□□ 0.32
DDX39AO00148 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DDX39AO00148 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.03■□□□□ 0.32
DDX39AO00148 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
DDX39AO00148 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 FAM86MP-201ENST00000340703 885 ntBASIC17.03■□□□□ 0.32
DDX39AO00148 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
DDX39AO00148 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.03■□□□□ 0.32
DDX39AO00148 RNA5SP412-201ENST00000516234 123 ntBASIC17.03■□□□□ 0.32
DDX39AO00148 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 AP006547.1-201ENST00000563435 692 ntBASIC17.03■□□□□ 0.32
DDX39AO00148 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 RN7SL219P-201ENST00000582872 296 ntBASIC17.03■□□□□ 0.32
DDX39AO00148 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.03■□□□□ 0.32
DDX39AO00148 OR10B1P-201ENST00000601666 907 ntBASIC17.03■□□□□ 0.32
DDX39AO00148 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms