Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TSPY5P-201ENST00000426936 936 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC122714.2-201ENST00000502787 707 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MCU-204ENST00000536019 3224 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZNF444P1-201ENST00000559497 298 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DLX4-206ENST00000611342 1662 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 LINC00567-201ENST00000569854 3409 ntBASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
BOLA2-SMG1P6H3BVE0 AC103564.2-201ENST00000432853 1299 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms