Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 AL109809.1-201ENST00000418979 1367 ntBASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM88BA6NKF7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 TEKT4P2-202ENST00000559466 1312 ntBASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 AC127383.1-201ENST00000444697 1800 ntBASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 ALG1L3P-201ENST00000503331 765 ntBASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM88BA6NKF7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM88BA6NKF7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC003102.2-201ENST00000589195 1469 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 TLE1P1-201ENST00000422965 589 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 OR2R1P-201ENST00000441404 914 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC006529.1-201ENST00000459978 637 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC090136.2-201ENST00000517809 420 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 KRT8P1-201ENST00000557533 1207 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AL590235.1-201ENST00000564650 861 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 LINC00244-201ENST00000625073 613 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 AC006372.4-201ENST00000624122 1543 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 FLJ38576-201ENST00000623820 2459 ntBASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM88BA6NKF7 ZBED1P1-201ENST00000502364 1930 ntBASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AL136172.1-201ENST00000598590 1394 ntBASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms