Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.08■□□□□ 0
TBC1D3FA6NER0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.08■□□□□ 0
TBC1D3FA6NER0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TBC1D3FA6NER0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 REXO1L4P-201ENST00000605109 1937 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 MESTP3-201ENST00000503460 968 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AL606495.2-201ENST00000605867 535 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AC020658.6-201ENST00000623564 1870 ntBASIC15.07■□□□□ 0
TBC1D3FA6NER0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TBC1D3FA6NER0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TBC1D3FA6NER0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 AKR7A2P1-201ENST00000460134 915 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 AP003171.2-201ENST00000528208 925 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 AC020914.3-201ENST00000594712 304 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 AC007663.3-201ENST00000609632 465 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 AP001002.3-201ENST00000623482 206 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 AC105917.1-201ENST00000506637 2539 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 PCDHA3-202ENST00000532566 4594 ntBASIC15.06■□□□□ 0
TBC1D3FA6NER0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.06■□□□□ 0
TBC1D3FA6NER0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.06■□□□□ 0
TBC1D3FA6NER0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms