Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 TUBB3P1-201ENST00000405796 1332 ntBASIC16.14■□□□□ 0.17
RCCD1A6NED2 AC093525.8-201ENST00000624099 1342 ntBASIC16.14■□□□□ 0.17
RCCD1A6NED2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 KRT18P13-201ENST00000400056 1290 ntBASIC16.13■□□□□ 0.17
RCCD1A6NED2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 UPF3AP3-201ENST00000420996 769 ntBASIC16.13■□□□□ 0.17
RCCD1A6NED2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 RN7SL718P-201ENST00000581254 303 ntBASIC16.13■□□□□ 0.17
RCCD1A6NED2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RCCD1A6NED2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RCCD1A6NED2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AL158070.2-201ENST00000623713 1621 ntBASIC16.12■□□□□ 0.17
RCCD1A6NED2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AC211486.1-202ENST00000416371 468 ntBASIC16.12■□□□□ 0.17
RCCD1A6NED2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AL589987.1-201ENST00000453380 819 ntBASIC16.12■□□□□ 0.17
RCCD1A6NED2 HLA-J-203ENST00000494367 1087 ntBASIC16.12■□□□□ 0.17
RCCD1A6NED2 AC211476.1-201ENST00000503899 468 ntBASIC16.12■□□□□ 0.17
RCCD1A6NED2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RCCD1A6NED2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RCCD1A6NED2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms