Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 CICP7-201ENST00000432723 2477 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 LINC00567-201ENST00000569854 3409 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC005696.4-201ENST00000614400 3147 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AL354861.3-201ENST00000600140 2412 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SHC1P1-201ENST00000425230 1745 ntBASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 AC003669.1-201ENST00000334569 611 ntBASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 KRT18P11-201ENST00000435214 1283 ntBASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 AGGF1P1-201ENST00000509500 2073 ntBASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms