Protein–RNA interactions for Protein: Q9Y385

UBE2J1, Ubiquitin-conjugating enzyme E2 J1, humanhuman

Predicted RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2J1Q9Y385 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2J1Q9Y385 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AC092183.1-201ENST00000469884 875 ntBASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AL590560.3-201ENST00000623350 461 ntBASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 ZBED1P1-201ENST00000502364 1930 ntBASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AJ011931.1-201ENST00000618749 2492 ntBASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2J1Q9Y385 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 AC015656.1-201ENST00000624209 3578 ntBASIC13□□□□□ -0.33
UBE2J1Q9Y385 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2J1Q9Y385 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2J1Q9Y385 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms