Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 GPAA1P2-201ENST00000417923 928 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 GOLGA2P4-201ENST00000441462 777 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AL590640.2-201ENST00000457038 527 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AL118558.3-201ENST00000607414 1079 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AC026748.1-201ENST00000624349 3251 ntBASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AC112693.3-201ENST00000624819 1983 ntBASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AC084346.2-201ENST00000607097 949 ntBASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AHCYP2-201ENST00000430630 1300 ntBASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.17■□□□□ 0.34
HDAC6Q9UBN7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 RNU1-114P-201ENST00000365297 166 ntBASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HDAC6Q9UBN7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms