Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 LRRC59-203ENST00000576448 1531 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 ACTBP8-201ENST00000403258 1108 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 KRT18P25-201ENST00000508931 1278 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC022616.1-201ENST00000518688 554 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 TDH-203ENST00000531764 1110 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC023090.2-201ENST00000625182 2110 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC018529.2-202ENST00000611482 3087 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 AC055811.4-201ENST00000624039 1754 ntBASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SMC4Q9NTJ3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 ACTG1P3-201ENST00000431775 1114 ntBASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 AC011495.1-201ENST00000498085 584 ntBASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 DUX4L47-201ENST00000566374 394 ntBASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMC4Q9NTJ3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
SMC4Q9NTJ3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
SMC4Q9NTJ3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 AC012441.1-201ENST00000446669 685 ntBASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 AC026434.2-201ENST00000506094 1078 ntBASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 AC068587.3-201ENST00000526613 355 ntBASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.45■□□□□ 0.7
SMC4Q9NTJ3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms