Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.73□□□□□ -0.21
CHD8Q9HCK8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 ALOX12P2-203ENST00000570921 1945 ntBASIC13.72□□□□□ -0.21
CHD8Q9HCK8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 RN7SL288P-201ENST00000490496 291 ntBASIC13.72□□□□□ -0.21
CHD8Q9HCK8 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHD8Q9HCK8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 HMGA1P2-201ENST00000430198 324 ntBASIC13.71□□□□□ -0.21
CHD8Q9HCK8 STK24P1-201ENST00000455035 1291 ntBASIC13.71□□□□□ -0.21
CHD8Q9HCK8 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.71□□□□□ -0.21
CHD8Q9HCK8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 KRT18P4-201ENST00000422599 1288 ntBASIC13.71□□□□□ -0.22
CHD8Q9HCK8 RN7SL530P-201ENST00000485097 298 ntBASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AC011431.1-201ENST00000512971 230 ntBASIC13.71□□□□□ -0.22
CHD8Q9HCK8 KRT127P-201ENST00000547183 433 ntBASIC13.71□□□□□ -0.22
CHD8Q9HCK8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
CHD8Q9HCK8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms