Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 AC007541.1-201ENST00000570282 1469 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 PIN1P1-201ENST00000412108 996 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 GIMAP3P-201ENST00000495150 836 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 AC004233.3-201ENST00000607794 1269 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 AL358472.5-202ENST00000641448 1267 ntBASIC15.17■□□□□ 0.02
MRM3Q9HC36 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
MRM3Q9HC36 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRM3Q9HC36 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 BX640514.1-201ENST00000583223 1918 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ACKR1-201ENST00000368121 1240 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 MYCLP2-201ENST00000449268 967 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 CHCHD2P3-201ENST00000603038 451 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 AC015802.1-201ENST00000588104 1449 ntBASIC15.16■□□□□ 0.02
MRM3Q9HC36 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRM3Q9HC36 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MRM3Q9HC36 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
MRM3Q9HC36 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRM3Q9HC36 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
MRM3Q9HC36 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms