Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC4Q9HBW1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 KRT17P8-201ENST00000540749 863 ntBASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 AC145423.3-201ENST00000615987 467 ntBASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRC4Q9HBW1 AC144831.1-201ENST00000573312 2656 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 C2orf27AP3-201ENST00000434123 579 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 U91328.1-201ENST00000437528 223 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 AC106886.1-201ENST00000568660 600 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 AL354718.3-201ENST00000616414 581 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 CR382287.1-201ENST00000623954 586 ntBASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC4Q9HBW1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 REXO1L2P-201ENST00000425429 2069 ntBASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 AC006058.4-201ENST00000624016 1670 ntBASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRC4Q9HBW1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 LILRP1-201ENST00000444199 1370 ntBASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRC4Q9HBW1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms