Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.52□□□□□ -0.25
MMP28Q9H239 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MMP28Q9H239 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.52□□□□□ -0.25
MMP28Q9H239 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MMP28Q9H239 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
MMP28Q9H239 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
MMP28Q9H239 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MMP28Q9H239 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 AP001282.1-201ENST00000531301 1499 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AC211486.1-202ENST00000416371 468 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 DNAJB3-202ENST00000449667 1266 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AC211476.1-201ENST00000503899 468 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AC112191.1-201ENST00000523689 701 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AL161645.1-201ENST00000622716 1255 ntBASIC13.51□□□□□ -0.25
MMP28Q9H239 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MMP28Q9H239 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.51□□□□□ -0.25
MMP28Q9H239 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 AL118506.1-201ENST00000601296 3082 ntBASIC13.5□□□□□ -0.25
MMP28Q9H239 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.5□□□□□ -0.25
MMP28Q9H239 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MMP28Q9H239 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 WASH3P-207ENST00000560956 1394 ntBASIC13.5□□□□□ -0.25
MMP28Q9H239 FO538757.1-201ENST00000623083 1397 ntBASIC13.5□□□□□ -0.25
MMP28Q9H239 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.5□□□□□ -0.25
MMP28Q9H239 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MMP28Q9H239 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.5□□□□□ -0.25
MMP28Q9H239 AC092474.2-201ENST00000424288 719 ntBASIC13.5□□□□□ -0.25
MMP28Q9H239 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.5□□□□□ -0.25
MMP28Q9H239 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.5□□□□□ -0.25
MMP28Q9H239 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms